Implementing Biomarker-Informed Cancer Care in NSCLC
Non-Small Cell Lung Cancer
Most cases (47.6%) of non–small cell lung cancer (NSCLC) cases are advanced or metastatic at diagnosis,1 and 54% of early-stage cases will eventually progress to stage IV.2
Patients with advanced or metastatic NSCLC may be eligible to receive targeted therapy and should have comprehensive genomic profiling performed to test for actionable biomarkers.3
However, less than 40% of eligible patients with NSCLC receive targeted therapy.4 Practice gaps in the NSCLC treatment journey contribute to this patient loss.4 Implementing strategic solutions to standardize and optimize protocols in key workflow areas may help improve overall patient access to targeted therapies. Click below to learn more about each step of the NSCLC treatment journey.
Patient Identification
Identifying patients who will benefit from precision medicine and selecting the right first-line therapy is essential to optimizing patient outcomes in NSCLC.5,6 Inappropriate first-line therapies based on incomplete testing are unlikely to be effective and can lead to increased toxicity with subsequent targeted treatments. To optimize selection of the most appropriate first-line therapy, comprehensive molecular testing, in combination with conservative use of IHC, should be performed at diagnosis before initiating treatment in all patients with advanced or metastatic NSCLC.
More than half of all patients with NSCLC harbor potentially actionable genomic alterations; however, many of these individual alterations occur with relatively low frequency.7 Thus, identifying patients who will benefit from precision medicine often involves detecting relatively rare gene alterations. Successfully doing so allows for targeting of actionable alterations with precision medicine, which potentially improves survival in patients with NSCLC.5,6
The use of targeted therapy has been associated with a more favorable outcome in advanced NSCLC, with a 31% reduction in risk of death and improved survival duration that was approximately 1.5-fold longer compared with patients with an identified mutational driver but did not receive targeted therapy.8 Comprehensive testing is recommended to identify potentially actionable biomarkers and optimize choice of therapy in patients with NSCLC.9
Frequency of Genomic Alterations in NSCLC Adenocarcinoma1

PD-1 and PD-L1 Testing
Microsatellite Instability and DNA Mismatch Repair
Tumor Mutational Burden
Sample Collection
Collection technique affects diagnostic yield and downstream success of genomic testing (molecular yield). Identifying the reason for biopsy can help choose the best method to optimize yield.71-73
Thoughtful selection of the appropriate biopsy approach (eg, technique, needle gauge) for specimen collection can ensure sufficient material is available to render a diagnosis and provide comprehensive biomarker testing from a single procedure.74
If initial biopsy reveals lung adenocarcinoma, but limited tissue remains after diagnostic workup75:
- Communicate presence of limited testing material to the ordering provider
- Prioritize testing for targets most likely to be identified and/or smaller panels that are less likely to be QNS
- Consider ordering a liquid biopsy (ctDNA assay)
- Consider repeat biopsy, and communicate “molecular priority” protocol for known diagnosis
- Consider testing alternative specimens (see “Tissue Stewardship”)
Approximate Diagnostic Yield of Tissue Collection Techniques71-73
ROSE has the potential to positively impact outcomes.76-80
Each molecular laboratory will have a minimal amount and concentration of tumor cells required for accurate detection of molecular alterations, based on the specific tumor enrichment protocols available and assay platforms used for testing.81 Most NGS platforms require a sample size of ≥25 mm² tumor surface area and ≥20% viable tumor nuclei per sample.82,
Tissue blocks that are adequate for molecular testing should be tracked and by flagging in the report for the tissue navigator and/or lab technician.84
Tissue Stewardship
While resection specimens have abundant tissue available for testing, they are available only in a small subset of patients with NSCLC.81 Thus, it is necessary to consider other types of specimens that might require testing.81 The majority of patients with lung cancer are diagnosed after examination of a small biopsy or cytology specimen of the primary lesion or a suspected metastasis.81 It has been well documented that small biopsy specimens, cytology cell blocks, and cytology touch imprints or aspirate slides are suitable for molecular testing.81
Impact of Acquisition Method on Sequencing Success85
Implementing standardized tissue-specific procedures and optimizing pre-analytic conditions by processing samples according to lab specifications via a preferred vendor may help reduce quantity not sufficient (QNS) rates and downstream sequencing failure.85,87
Selecting a Molecular Test
Although a single gene test (SGT) may have a shorter turnaround time than NGS, NGS is faster than sequential testing with SGTs.88 Upfront NGS testing in metastatic NSCLC is associated with reduced cost and time-to-results for commercial and CMS payers.89
Additionally, with a sequential single-gene approach, tumor tissue may be insufficient, and some biomarkers may come back without results, which may impact treatment strategy and patient outcomes.86
Single Gene Test vs Comprehensive Profiling86
Molecular Testing Options to Identify Targetable, Sensitizing Alterations in NSCLC9,14,47,55,68,90-94
Use of tissue- and plasma-based (ctDNA) testing are acceptable in the advanced/metastatic NSCLC setting, whether used sequentially or concurrently. Concurrent testing has the potential to reduce TAT if a protracted wait is anticipated for tissue-based results or may also be indicated in cases where there is limited tumor tissue available and QNS is probable. The identification of an actionable driver mutation by either method is sufficient to start therapy. Conversely, the absence of an actionable driver mutation in either assay does warrant the use of a complementary method. Additional advantages and disadvantages to both testing approaches are outlined below.
Disadvantages: Longer TAT, limited tissue quantity/quality, invasive at disease progression, re-biopsy not always feasible, tumor heterogeneity
Disadvantages: Non-DNA biomarkers are not evaluable, Low tumor fraction, presence of mutations from sites other than the target lesion, most commonly ChIP
Disadvantages: Potential increased costs
Diagnostic Algorithm for ctDNA Testing Use in Treatment-naïve Advanced/Metastatic NSCLC89,95

Multidisciplinary Communication

Learn from Drs. Jill Kolesar and Ravneet Thind about how the multidisciplinary communication facilitated by a molecular tumor board can enable biomarker-informed decision-making and optimize therapeutic options for patients.
As molecular diagnostic testing is becoming increasingly sophisticated and complex, molecular tumor boards can bring relevant expertise to this rapidly emerging field and are crucial for patient care.
>16% increase in recommended treatment choice96,97
~30% decrease in time to treatment initiation96-98
~40% absolute increase in overall patient survival rate99
Expanding Molecular Tumor Boards to Community Settings with Drs Jill Kolesar and Ravneet Thind
QUESTION 02: What are the advantages of an MTB?
Dr. Kolesar: We implemented a molecular tumor board with the intention of increasing the rates of molecular testing, which we anticipated would decrease turnaround time for testing, increase access to clinical trials, and ultimately, more patients receiving biomarker-informed treatment decisions.
Dr. Thind: Due to the general cytotoxicity of conventional chemotherapy, focus has now shifted to novel therapeutic targets that can be exploited based on genomic data and molecular tumor board recommendations. So as Jill mentioned previously, molecular tumor boards can increase guideline-concordant testing and decrease turnaround time for molecular testing, which enables biomarker-informed decision-making and optimizes therapeutic options for our patients.
Dr. Kolesar: Dr. Thind, as you can see in this figure from our case-control study, we showed that patients with non–small cell lung cancer who had their cases reviewed by a molecular tumor board had improved overall survival compared to those who did not, regardless of whether they were treated in an academic setting or a community.
- Hosting virtual meetings
- Providing a molecular tumor board-dedicated navigator
Expanding Molecular Tumor Boards to Community Settings with Drs Jill Kolesar and Ravneet Thind
QUESTION 02: What elements were necessary for extension of the MTB to rural community sites?
Dr. Kolesar: I think the most important part was really to make it easy for sites to participate. So to do that, we held a virtual meeting, and we had a molecular tumor board coordinator that managed the cases referred from the community sites.
Our coordinator interacts with clinic staff from the treating physician office to gather up the notes and NGS reports for review and to provide the written recommendations back. They also coordinate the virtual meeting.
Dr. Thind: Yes, I agree. I think having a molecular tumor board–dedicated navigator has been a game changer. Along with excellent communication and support from the University of Kentucky, with clear and precise explanation of the entire process.
Dr. Kolesar: I think it was also really helpful to demonstrate the clinical benefit showing that patients with molecular tumor board review had better outcomes.
And having wide clinical and genomic expertise, with evidence grading were also critical to the success of the molecular tumor board.
- Consolidation of reports and upload into EMR
- Follow-up of results and communication of findings
- Facilitation of multidisciplinary discussions

Treatment Decision
- Test for certain molecular and immune biomarkers in all appropriate patients with NSCLC
- Have molecular testing results for the actionable oncogenic mutations before starting systemic therapy combined with immunotherapy
- Treat patients with oncogenic driver mutations with targeted first-line therapy for that oncogene rather than first-line ICIs
- Judicious use of IHC to conserve tumor tissue for molecular studies, especially in patients with advanced disease
- Broad molecular profiling using a validated test to minimize tissue use and potential wastage and assess all recommended biomarkers in all appropriate patients with NSCLC
- Patients with these oncogenic mutations should receive treatment with targeted agents
- Perform broad molecular profiling using a validated test to minimize tissue use and potential wastage and assess a for actionable genetic biomarkers
- Have molecular testing results for the actionable oncogenic mutations before starting systemic therapy combined with immunotherapy
- Treat patients with oncogenic driver mutations with targeted first-line therapy for that oncogene
The roadmap is designed to be used in discussions HCPs and their patients with NSCLC to facilitate informative and meaningful conversations that will help prepare patients to begin their treatment journeys. Discussion topics include guideline-concordant molecular biomarker testing, as well as recommendations on traditional chemotherapy, chemoimmunotherapy, and oncogene-targeted therapy treatment options for these patients. See the “Related Resources” section to download the roadmap, discussion guide, and accompanying video for your patients.
Every patient diagnosed with non-small cell lung cancer is embarking on a personal treatment journey.
The decisions they make can impact not only their outcomes, but the kinds of obstacles they will face along the way.
While providing medical explanations and trusted advice, you are often your patient’s main source of information. The tone you set and guidance you provide impacts patient decision making.
One way to help patients make the best decision for themselves is to provide as much insight and data as possible. Molecular biomarker testing can provide the most appropriate roadmap to navigate treatment options, but the wait time for results can be difficult.
One way to help patients make the best decision for themselves is to provide as much insight and data as possible. Molecular biomarker testing can provide the most appropriate roadmap to navigate treatment options, but the wait time for results can be difficult.
Do they stay on this route and wait for traffic to clear or do they take an exit and search for a path around the backup?
For a patient, waiting to receive molecular biomarker test results may seem as frustrating as the wait in traffic. But with much higher stakes. When multiple treatment paths can be taken, each requires careful planning for optimal outcomes.
Let’s look at three possible scenarios.
When the dark blue car encounters the traffic jam, they’re anxious and feel the need to begin treatment immediately, instead of waiting for biomarker results.
For the driver, feeling like they need to refuel may lead them to exit and fill up at a nearby gas station before returning to the highway.
Similarly, starting a patient on a round of chemotherapy while waiting for biomarker results may achieve a compromise on treatment path with minimum impact on the efficacy of potential targeted therapies later.
Here, the light blue car also exits the highway to search for an alternate route. To keep moving, they choose a winding path through the city before eventually re-entering the highway later.
However, city streets come with their own obstacles, which can be as frustrating as waiting in the traffic jam and are not necessarily better routes to the driver’s destination.
Similarly, patients may want to explore treatment paths they can begin immediately instead of waiting for biomarker results. For patients eligible for immunotherapy, that treatment route may initially look better because it can be started quickly, but it may make them ineligible for later targeted therapy.
The red car, however, stays on the highway and waits through the traffic jam. It may seem tedious, but sometimes waiting for traffic to clear is the fastest way through.
Although molecular biomarker testing may come with a wait, results provide the most complete roadmap for navigating treatment.
Patients who are positive for an actionable biomarker can be given a targeted therapy, which tend to be better tolerated and have greater efficacy, for a clear path ahead as they navigate their cancer journey.
There are no “right” answers. But your guidance can help patients feel supported as they make difficult decisions.
You can find This Treatment Roadmap and other patient resources to help facilitate discussions with patients about treatment plans by scanning the QR codes.

Managing Disease Progression
Both intrinsic and acquired resistance remains a challenge when patients are treated with TKIs, with most patients experiencing disease progression. Intrinsic mechanisms are present before therapy, whereas acquired mechanisms are induced after therapy is initiated. Common mechanisms of resistance to TKIs include101-104:
- TKI domain or other drug-binding site mutations
- Downstream signaling effector mutations
- Bypass signaling pathways
For patients with a documented prior actionable alteration in whom the disease has progressed with therapy, retesting should be done exclusively on rebiopsy specimens of a progressing lesion. If a biopsy is performed on a suspected bony metastasis, it is critical that decalcification be avoided because some methods of decalcification can preclude any subsequent molecular testing.81
Post-diagnostic Use of Biopsies105
VV-MED-156089
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